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author:

Huang, Yusong (Huang, Yusong.) [1] | Wen, Dongjing (Wen, Dongjing.) [2] | Yuan, Yao (Yuan, Yao.) [3] | Chen, Wenfeng (Chen, Wenfeng.) [4] (Scholars:陈文锋)

Indexed by:

Scopus SCIE

Abstract:

Abnormal accumulation of alpha synuclein (alpha-Syn) in sporadic and familial Parkinson's disease (PD) may be a key step in its pathogenesis. In this study, the expression matrix of the GSE95427 dataset after alpha-Syn overexpression in human glioma cell line H4 was obtained from the GEO database. We used the Gene Set Enrichment Analysis (GSEA) method to reanalyze this dataset to evaluate the possible functions of alpha-Syn. The results showed that the tumor necrosis factor alpha (TNF-alpha) signal was significantly activated in alpha-Syn-overexpressing cells, and oxidative phosphorylation signal, extracellular matrix signal, cell cycle related signal and fatty acid metabolism signal were significantly inhibited. Moreover, we employed the alpha-Syn-expressing transgenic Drosophila model of Parkinson's disease and knocked-down eiger, a TNF superfamily ligand homologue, indicating that the TNF-alpha pathway plays a role in the common pathogenesis of synucleinopathies. Our analysis based on GSEA data provides more clues for a better understanding of alpha-Syn function.

Keyword:

alpha-Synuclein Drosophila gene set enrichment analysis Parkinson's disease signal pathway

Community:

  • [ 1 ] [Huang, Yusong]Fuzhou Univ, Inst Life Sci, Coll Biol Sci & Engn, Fuzhou 350108, Peoples R China
  • [ 2 ] [Wen, Dongjing]Fuzhou Univ, Inst Life Sci, Coll Biol Sci & Engn, Fuzhou 350108, Peoples R China
  • [ 3 ] [Yuan, Yao]Fuzhou Univ, Inst Life Sci, Coll Biol Sci & Engn, Fuzhou 350108, Peoples R China
  • [ 4 ] [Chen, Wenfeng]Fuzhou Univ, Inst Life Sci, Coll Biol Sci & Engn, Fuzhou 350108, Peoples R China

Reprint 's Address:

  • [Chen, Wenfeng]Fuzhou Univ, Inst Life Sci, Coll Biol Sci & Engn, Fuzhou 350108, Peoples R China;;

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Source :

BIOMEDICINES

ISSN: 2227-9059

Year: 2023

Issue: 2

Volume: 11

3 . 9

JCR@2023

3 . 9 0 0

JCR@2023

ESI Discipline: PHARMACOLOGY & TOXICOLOGY;

ESI HC Threshold:26

JCR Journal Grade:1

CAS Journal Grade:3

Cited Count:

WoS CC Cited Count: 1

SCOPUS Cited Count: 1

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

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