• Complex
  • Title
  • Keyword
  • Abstract
  • Scholars
  • Journal
  • ISSN
  • Conference
成果搜索

author:

Gan, Zhenhua (Gan, Zhenhua.) [1] | Zou, Fumin (Zou, Fumin.) [2] | Zeng, Nianyin (Zeng, Nianyin.) [3] | Xiong, Baoping (Xiong, Baoping.) [4] | Liao, Lyuchao (Liao, Lyuchao.) [5] | Li, Han (Li, Han.) [6] | Luo, Xin (Luo, Xin.) [7] | Du, Min (Du, Min.) [8]

Indexed by:

EI Scopus SCIE

Abstract:

A microarray can be easily used for quantitatively analyzing the expression levels of DNA genes. Yet, the noises introduced during the application will greatly affect the accuracy of DNA sequence detection. How to reduce the noise constitutes a challenging problem in microarray analysis. Especially, due to the weak fluorescence response, the image of microarray contains difficulties of the low peak-signal-to-noise ratio (PSNR) and luminance contrast. To solve the problem that the wavelet threshold denoising method has poor effective on low PSNR image, a wavelet denoising approach based on compression sensing (CS) optimized by the neural dynamics optimization algorithm (NDOA) is proposed, which preferably solves the denoising difficulties of noise pollution in the microarray image. Under the condition of Gaussian random observation matrix, the effectiveness of NDOA-optimized wavelet denoising based on CS gets better work than the orthogonal matching pursuit and its improved algorithms. The experimental results indicate that the expected wavelet coefficients of the noiseless image have been reconstructed with higher quality. When the compression sampling rate for microarray image is 0.875, the PSNR of the NDOA-optimized wavelet denoising algorithm based on CS is increased about 9 dB, and the root mean squared error is reduced obviously too, in comparison with the wavelet soft-threshold denoising method. It shows that the NDOA-optimized method improves the performance of the classical wavelet threshold denoising.

Keyword:

Compressed sensing DNA microarray image filtering NDOA wavelet denoising

Community:

  • [ 1 ] [Gan, Zhenhua]Fujian Univ Technol, Key Lab Automot Elect & Elect Drive Technol Fujia, Fuzhou 350118, Fujian, Peoples R China
  • [ 2 ] [Zou, Fumin]Fujian Univ Technol, Key Lab Automot Elect & Elect Drive Technol Fujia, Fuzhou 350118, Fujian, Peoples R China
  • [ 3 ] [Liao, Lyuchao]Fujian Univ Technol, Key Lab Automot Elect & Elect Drive Technol Fujia, Fuzhou 350118, Fujian, Peoples R China
  • [ 4 ] [Zou, Fumin]Fujian Univ Technol, Beidou Nav & Smart Traff Innovat Ctr Fujian Prov, Fuzhou 350118, Fujian, Peoples R China
  • [ 5 ] [Xiong, Baoping]Fujian Univ Technol, Beidou Nav & Smart Traff Innovat Ctr Fujian Prov, Fuzhou 350118, Fujian, Peoples R China
  • [ 6 ] [Zeng, Nianyin]Xiamen Univ, Dept Instrumental & Elect Engn, Xiamen 361005, Peoples R China
  • [ 7 ] [Li, Han]Xiamen Univ, Dept Instrumental & Elect Engn, Xiamen 361005, Peoples R China
  • [ 8 ] [Xiong, Baoping]Fuzhou Univ, Coll Phys & Informat Engn, Fuzhou 350116, Fujian, Peoples R China
  • [ 9 ] [Du, Min]Fuzhou Univ, Coll Phys & Informat Engn, Fuzhou 350116, Fujian, Peoples R China
  • [ 10 ] [Luo, Xin]Chinese Acad Sci, Chongqing Inst Green & Intelligent Technol, Chongqing Engn Res Ctr Big Data Applicat Smart Ci, Chongqing 400714, Peoples R China
  • [ 11 ] [Luo, Xin]Chinese Acad Sci, Chongqing Inst Green & Intelligent Technol, Chongqing Key Lab Big Data & Intelligent Comp, Chongqing 400714, Peoples R China

Reprint 's Address:

  • [Zeng, Nianyin]Xiamen Univ, Dept Instrumental & Elect Engn, Xiamen 361005, Peoples R China;;[Luo, Xin]Chinese Acad Sci, Chongqing Inst Green & Intelligent Technol, Chongqing Engn Res Ctr Big Data Applicat Smart Ci, Chongqing 400714, Peoples R China;;[Luo, Xin]Chinese Acad Sci, Chongqing Inst Green & Intelligent Technol, Chongqing Key Lab Big Data & Intelligent Comp, Chongqing 400714, Peoples R China

Show more details

Related Keywords:

Related Article:

Source :

IEEE ACCESS

ISSN: 2169-3536

Year: 2019

Volume: 7

Page: 13338-13346

3 . 7 4 5

JCR@2019

3 . 4 0 0

JCR@2023

ESI Discipline: ENGINEERING;

ESI HC Threshold:150

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 22

SCOPUS Cited Count: 28

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 3

Online/Total:2/10197647
Address:FZU Library(No.2 Xuyuan Road, Fuzhou, Fujian, PRC Post Code:350116) Contact Us:0591-22865326
Copyright:FZU Library Technical Support:Beijing Aegean Software Co., Ltd. 闽ICP备05005463号-1