• Complex
  • Title
  • Keyword
  • Abstract
  • Scholars
  • Journal
  • ISSN
  • Conference
成果搜索

author:

Gan, Z. (Gan, Z..) [1] | Zou, F. (Zou, F..) [2] | Zeng, N. (Zeng, N..) [3] | Xiong, B. (Xiong, B..) [4] | Liao, L. (Liao, L..) [5] | Li, H. (Li, H..) [6] | Luo, X. (Luo, X..) [7] | Du, M. (Du, M..) [8]

Indexed by:

Scopus

Abstract:

A microarray can be easily used for quantitatively analyzing the expression levels of DNA genes. Yet, the noises introduced during the application will greatly affect the accuracy of DNA sequence detection. How to reduce the noise constitutes a challenging problem in microarray analysis. Especially, due to the weak fluorescence response, the image of microarray contains difficulties of the low peak-signal-to-noise ratio (PSNR) and luminance contrast. To solve the problem that the wavelet threshold denoising method has poor effective on low PSNR image, a wavelet denoising approach based on compression sensing (CS) optimized by the neural dynamics optimization algorithm (NDOA) is proposed, which preferably solves the denoising difficulties of noise pollution in the microarray image. Under the condition of Gaussian random observation matrix, the effectiveness of NDOA-optimized wavelet denoising based on CS gets better work than the orthogonal matching pursuit and its improved algorithms. The experimental results indicate that the expected wavelet coefficients of the noiseless image have been reconstructed with higher quality. When the compression sampling rate for microarray image is 0.875, the PSNR of the NDOA-optimized wavelet denoising algorithm based on CS is increased about 9 dB, and the root mean squared error is reduced obviously too, in comparison with the wavelet soft-threshold denoising method. It shows that the NDOA-optimized method improves the performance of the classical wavelet threshold denoising. © 2019 IEEE.

Keyword:

Compressed sensing; DNA microarray; image filtering; NDOA; wavelet denoising

Community:

  • [ 1 ] [Gan, Z.]Key Laboratory of Automotive Electronics and Electric Drive Technology of Fujian Province, Fujian University of Technology, Fuzhou, 350118, China
  • [ 2 ] [Zou, F.]Key Laboratory of Automotive Electronics and Electric Drive Technology of Fujian Province, Fujian University of Technology, Fuzhou, 350118, China
  • [ 3 ] [Zou, F.]Beidou Navigation and Smart Traffic Innovation Center of Fujian Province, Fujian University of Technology, Fuzhou, 350118, China
  • [ 4 ] [Zeng, N.]Department of Instrumental and Electrical Engineering, Xiamen University, Xiamen, 361005, China
  • [ 5 ] [Xiong, B.]Beidou Navigation and Smart Traffic Innovation Center of Fujian Province, Fujian University of Technology, Fuzhou, 350118, China
  • [ 6 ] [Xiong, B.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, 350116, China
  • [ 7 ] [Liao, L.]Key Laboratory of Automotive Electronics and Electric Drive Technology of Fujian Province, Fujian University of Technology, Fuzhou, 350118, China
  • [ 8 ] [Li, H.]Department of Instrumental and Electrical Engineering, Xiamen University, Xiamen, 361005, China
  • [ 9 ] [Luo, X.]Chongqing Engineering Research Center of Big Data Application for Smart Cities, Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China
  • [ 10 ] [Luo, X.]Chongqing Key Laboratory of Big Data and Intelligent Computing, Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China
  • [ 11 ] [Du, M.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, 350116, China

Reprint 's Address:

  • [Zeng, N.]Department of Instrumental and Electrical Engineering, Xiamen UniversityChina

Show more details

Related Keywords:

Related Article:

Source :

IEEE Access

ISSN: 2169-3536

Year: 2019

Volume: 7

Page: 13338-13346

3 . 7 4 5

JCR@2019

3 . 4 0 0

JCR@2023

ESI HC Threshold:150

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 28

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

Affiliated Colleges:

Online/Total:53/10198491
Address:FZU Library(No.2 Xuyuan Road, Fuzhou, Fujian, PRC Post Code:350116) Contact Us:0591-22865326
Copyright:FZU Library Technical Support:Beijing Aegean Software Co., Ltd. 闽ICP备05005463号-1