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author:

Zhou, Xi (Zhou, Xi.) [1] | Cao, Yingying (Cao, Yingying.) [2] | Huang, Xiaocui (Huang, Xiaocui.) [3] | Qiu, Shuqian (Qiu, Shuqian.) [4] | Xiang, Xinran (Xiang, Xinran.) [5] | Niu, Huimin (Niu, Huimin.) [6] | Chen, Li (Chen, Li.) [7] | Wang, Shuiliang (Wang, Shuiliang.) [8] | Lin, Zhenyu (Lin, Zhenyu.) [9] (Scholars:林振宇) | Zhang, Shenghang (Zhang, Shenghang.) [10]

Indexed by:

Scopus SCIE

Abstract:

Rapid detection of heparin-binding protein (HBP) is essential for timely intervention in sepsis cases. Current detection techniques are usually antibody-based immunological methods, which have certain problems, such as complexity and slow detection, and fall short in meeting the urgency of clinical needs. The application of an aptamer can address these concerns well. In this study, HBP-specific DNA aptamers were screened first. Among which, Apt-01, Apt-02, and Apt-13 had a high affinity for HBP, exhibiting impressive KD values of 3.42, 1.44, and 1.04 nmol/L, respectively. Then, the aptamer of HBP and its partially complementary primer probe were combined to form double-stranded DNA (dsDNA) and synthesize a circular DNA template. The template is complementary to the primer probe, but due to the presence of dsDNA, ExoIII cleaves C2-13 as an RCA primer probe, rendering the template unable to recognize the primer probe and preventing the RCA reaction from proceeding. When the target is present, it competes with the adapter for recognition and releases C2-13, exposing its 3 ' end. After initiating the RCA at room temperature and reacting with SYBR GreenII at 37 degrees C for 20 min, fluorescence changes can be observed and quantitatively analyzed at a 530 nm wavelength, achieving quantitative biological analysis. Apt-01 was used to develop a fluorescent biosensor for HBP detection, which exhibited a good linear range (0.01 nmol/L to 10 nmol/L) and detection limit (0.0056 nmol/L). This advancement holds the potential to lay a solid groundwork for pioneering sensitive and specific methods for HBP detection and to significantly enhance the diagnostic processes for sepsis.

Keyword:

aptamers biosensors heparin-binding protein rolling circle amplification sepsis

Community:

  • [ 1 ] [Zhou, Xi]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 2 ] [Cao, Yingying]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 3 ] [Qiu, Shuqian]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 4 ] [Xiang, Xinran]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 5 ] [Niu, Huimin]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 6 ] [Chen, Li]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 7 ] [Wang, Shuiliang]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 8 ] [Zhang, Shenghang]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China
  • [ 9 ] [Zhou, Xi]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 10 ] [Cao, Yingying]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 11 ] [Qiu, Shuqian]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 12 ] [Xiang, Xinran]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 13 ] [Niu, Huimin]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 14 ] [Chen, Li]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 15 ] [Wang, Shuiliang]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 16 ] [Zhang, Shenghang]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China
  • [ 17 ] [Huang, Xiaocui]Fujian Inst Educ, Dept Sci Res & Training, Fuzhou 350001, Peoples R China
  • [ 18 ] [Lin, Zhenyu]Fuzhou Univ, Coll Chem, MOE Key Lab Anal & Detect Food Safety & Biol, Fujian Prov Key Lab Anal & Detect Technol Food Saf, Fuzhou 350116, Peoples R China

Reprint 's Address:

  • 林振宇

    [Zhang, Shenghang]Fujian Univ Tradit Chinese Med, Fuzhou Gen Teaching Hosp, Hosp 900, Fujian Key Lab Aptamers Technol, Fuzhou 350025, Peoples R China;;[Zhang, Shenghang]Fujian Med Univ, Fuzhou Gen Clin Med Sch, Dept Clin Lab Med, Fuzhou 350025, Peoples R China;;[Lin, Zhenyu]Fuzhou Univ, Coll Chem, MOE Key Lab Anal & Detect Food Safety & Biol, Fujian Prov Key Lab Anal & Detect Technol Food Saf, Fuzhou 350116, Peoples R China

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Source :

MOLECULES

ISSN: 1420-3049

Year: 2024

Issue: 8

Volume: 29

4 . 2 0 0

JCR@2023

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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