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author:

Li, X. (Li, X..) [1] | Yang, X. (Yang, X..) [2] | Pan, Z. (Pan, Z..) [3] | Zhuo, S. (Zhuo, S..) [4] | Lin, Z. (Lin, Z..) [5] | Chen, J. (Chen, J..) [6]

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Scopus

Abstract:

Circulating cell-free DNA (cfDNA) is known to be an attractive biomarker for liquid biopsy. In this work, a rapid and sensitive biosensor was achieved for cfDNA detection based on CRISPR-associated nuclease 12a (CRISPR-Cas12a) and single nanoparticle dark-field microscopy (DFM) imaging. The biosensor employed gold nanoparticles (AuNPs) as signal source, DFM as readout system, and Meanshift algorithms as the image processing systems, respectively. The presence or absence of cfDNA caused the different existing states (monomer or aggregated state) of AuNPs. AuNPs monomers could be effectively distinguished from the aggregated ones under DFM since the AuNPs aggregation could induced the green-to-yellow or green-to-red changing of scattering color. The monomer ratio easily obtained by Meanshift and partial least-square (PLS) algorithms was used for quantitative analysis. Using this strategy, breast cancer gene-1 (BRCA-1), a representative of cfDNA biomarker for breast cancer could be measured with high sensitivity in 40 min and has a low detection limit of 0.081 fM. It is hoped that this nucleic acid amplification-free sensor could be also utilized to detect other nucleic acid biomarkers, and thus, provides a novel strategy for biomedical image analysis. © 2024 Elsevier B.V.

Keyword:

CfDNA CRISPR/Cas12a Dark-field microscopy imaging Gold nanoparticle

Community:

  • [ 1 ] [Li X.]Key Laboratory of OptoElectronic Science and Technology for Medicine of Ministry of Education, Fujian Provincial Key Laboratory of Photonics Technology, Fujian Normal University, Fujian, Fuzhou, 350007, China
  • [ 2 ] [Li X.]Department of Clinical Laboratory, School of Medical Technology and Engineering, Fujian Medical University, Fujian, Fuzhou, 350004, China
  • [ 3 ] [Yang X.]Department of Clinical Laboratory, School of Medical Technology and Engineering, Fujian Medical University, Fujian, Fuzhou, 350004, China
  • [ 4 ] [Pan Z.]Department of Clinical Laboratory, School of Medical Technology and Engineering, Fujian Medical University, Fujian, Fuzhou, 350004, China
  • [ 5 ] [Zhuo S.]School of Science, Jimei University, Fujian, Xiamen, 361021, China
  • [ 6 ] [Lin Z.]Ministry of Education Key Laboratory for Analysis Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection for Food Safety, College of Chemistry, Fuzhou University, Fujian, Fuzhou, 350116, China
  • [ 7 ] [Chen J.]Key Laboratory of OptoElectronic Science and Technology for Medicine of Ministry of Education, Fujian Provincial Key Laboratory of Photonics Technology, Fujian Normal University, Fujian, Fuzhou, 350007, China

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Source :

Sensors and Actuators B: Chemical

ISSN: 0925-4005

Year: 2024

Volume: 406

6 . 3 9 3

JCR@2018

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 1

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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