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[期刊论文]

The Antarctic Moss Pohlia nutans Genome Provides Insights Into the Evolution of Bryophytes and the Adaptation to Extreme Terrestrial Habitats

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author:

Liu, S. (Liu, S..) [1] | Fang, S. (Fang, S..) [2] | Cong, B. (Cong, B..) [3] | Unfold

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Scopus

Abstract:

The Antarctic continent has extreme natural environment and fragile ecosystem. Mosses are one of the dominant floras in the Antarctic continent. However, their genomic features and adaptation processes to extreme environments remain poorly understood. Here, we assembled the high-quality genome sequence of the Antarctic moss (Pohlia nutans) with 698.20 Mb and 22 chromosomes. We found that the high proportion of repeat sequences and a recent whole-genome duplication (WGD) contribute to the large size genome of P. nutans when compared to other bryophytes. The genome of P. nutans harbors the signatures of massive segmental gene duplications and large expansions of gene families, likely facilitating neofunctionalization. Genomic characteristics that may support the Antarctic lifestyle of this moss comprise expanded gene families involved in phenylpropanoid biosynthesis, unsaturated fatty acid biosynthesis, and plant hormone signal transduction. Additional contributions include the significant expansion and upregulation of several genes encoding DNA photolyase, antioxidant enzymes, flavonoid biosynthesis enzymes, possibly reflecting diverse adaptive strategies. Notably, integrated multi-omic analyses elucidate flavonoid biosynthesis may function as the reactive oxygen species detoxification under UV-B radiation. Our studies provide insight into the unique features of the Antarctic moss genome and their molecular responses to extreme terrestrial environments. Copyright © 2022 Liu, Fang, Cong, Li, Yi, Zhang, Zhao and Zhang.

Keyword:

Antarctic bryophyte; flavonoid biosynthesis; gene-family expansions; metabolomic profiling; UV-B radiation; whole-genome sequencing

Community:

  • [ 1 ] [Liu, S.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 2 ] [Liu, S.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
  • [ 3 ] [Fang, S.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 4 ] [Cong, B.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 5 ] [Cong, B.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
  • [ 6 ] [Li, T.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 7 ] [Yi, D.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 8 ] [Zhang, Z.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 9 ] [Zhao, L.]Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
  • [ 10 ] [Zhao, L.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
  • [ 11 ] [Zhang, P.]National Glycoengineering Research Center, School of Life Sciences and Shandong University, Qingdao, China

Reprint 's Address:

  • 待查

    [Zhao, L.]Key Laboratory of Marine Eco-Environmental Science and Technology, China; ; National Glycoengineering Research Center, China; 电子邮件: zhangpy80@sdu.edu.cn

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Source :

Frontiers in Plant Science

ISSN: 1664-462X

Year: 2022

Volume: 13

5 . 6

JCR@2022

4 . 1 0 0

JCR@2023

ESI HC Threshold:34

JCR Journal Grade:1

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count:

30 Days PV: 0

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