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author:

Wang, G. (Wang, G..) [1] | Huang, X. (Huang, X..) [2] | Ng, T.B. (Ng, T.B..) [3] | Lin, J. (Lin, J..) [4] | Ye, X.Y. (Ye, X.Y..) [5]

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Scopus

Abstract:

Soda lakes are one of the most stable naturally occurring alkaline and saline environments, which harbor abundant microorganisms with diverse functions. In this study, culture-independent molecular methods were used to explore the genetic diversity of glycoside hydrolase (GH) family 10 and GH11 xylanases in Lake Dabusu, a soda lake with a pH value of 10.2 and salinity of 10.1%. A total of 671 xylanase gene fragments were obtained, representing 78 distinct GH10 and 28 GH11 gene fragments respectively, with most of them having low homology with known sequences. Phylogenetic analysis revealed that the GH10 xylanase sequences mainly belonged to Bacteroidetes, Proteobacteria, Actinobacteria, Firmicutes and Verrucomicrobia, while the GH11 sequences mainly consisted of Actinobacteria, Firmicutes and Fungi. A full-length GH10 xylanase gene (xynAS10-66) was directly cloned and expressed in Escherichia coli, and the recombinant enzymes showed high activity at alkaline pH. These results suggest that xylanase gene diversity within Lake Dabusu is high and that most of the identified genes might be novel, indicating great potential for applications in industry and agriculture. Copyright: © 2014 Wang et al.

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Community:

  • [ 1 ] [Wang, G.]College of Biological Science and Technology, Fuzhou University, Fuzhou, 350108, China
  • [ 2 ] [Wang, G.]National Engineering Laboratory for High-efficiency Enzyme Expression, Fuzhou, 350002, China
  • [ 3 ] [Huang, X.]College of Biological Science and Technology, Fuzhou University, Fuzhou, 350108, China
  • [ 4 ] [Ng, T.B.]School of Biomedical Sciences, Faculty of Medicine, Chinese University of Hong Kong, Shatin, New Territories, Hong Kong
  • [ 5 ] [Lin, J.]College of Biological Science and Technology, Fuzhou University, Fuzhou, 350108, China
  • [ 6 ] [Lin, J.]National Engineering Laboratory for High-efficiency Enzyme Expression, Fuzhou, 350002, China
  • [ 7 ] [Ye, X.Y.]College of Biological Science and Technology, Fuzhou University, Fuzhou, 350108, China
  • [ 8 ] [Ye, X.Y.]National Engineering Laboratory for High-efficiency Enzyme Expression, Fuzhou, 350002, China

Reprint 's Address:

  • [Wang, G.]College of Biological Science and Technology, Fuzhou UniversityChina

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Source :

PLoS ONE

ISSN: 1932-6203

Year: 2014

Issue: 11

Volume: 9

3 . 2 3 4

JCR@2014

2 . 9 0 0

JCR@2023

ESI HC Threshold:320

JCR Journal Grade:1

CAS Journal Grade:3

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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