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[期刊论文]

Coupling technique of random amplified polymorphic DNA and nanoelectrochemical sensor for mapping pancreatic cancer genetic fingerprint

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author:

Liu, Qicai (Liu, Qicai.) [1] | Liu, Ailin (Liu, Ailin.) [2] | Gao, Feng (Gao, Feng.) [3] | Unfold

Indexed by:

SCIE

Abstract:

Objective: To review the feasibility of coupling the techniques of random amplified polymorphic DNA (RAPD) with carbon nanotube-based modified electrode for guanine/deoxy-guanine triphosphate (dGTP) electrochemical sensing for mapping of the pancreatic cancer genetic fingerprint and screening of genetic alterations. Methods: We developed a new method to study the electrochemical behavior of dGTP utilizing carbon multiwalled nanotube (MWNT)-modified glassy carbon electrodes (GCEs). RAPD was applied for amplification of DNA samples from healthy controls and patients with pancreatic cancer under the same conditions to determine the different surplus quantity of dGTP in the polymerase chain reaction (PCR), thereby determining the difference/quantity of PCR products or template strands. Using this method we generated a genetic fingerprint map of pancreatic cancer through the combination of electrochemical sensors and gel electrophoresis to screen for genetic alterations. Cloning and sequencing were then performed to verify these gene alterations. Results: dGTP showed favorable electrochemical behavior on the MWNTs/GCE. The results indicated that the electrical signal and dGTP had a satisfactory linear relationship with the dGTP concentration within the conventional PCR concentration range. The MWNTs/GCE could distinguish between different products of RAPD. This experiment successfully identified a new pancreatic cancer-associated mutant gene fragment, consisting of a cyclin-dependent kinase 4 gene 3' terminal mutation. Conclusion: The coupling of RAPD and nanoelectrochemical sensors was successfully applied to the screening of genetic alterations in pancreatic cancer and for mapping of DNA fingerprints.

Keyword:

carbon nanotube genetic fingerprint genetic predisposition nanoelectrochemical sensor pancreatic cancer random amplified polymorphic DNA

Community:

  • [ 1 ] [Liu, Ailin]Fujian Med Univ, Dept Pharmaceut Anal, Fuzhou 350005, Peoples R China
  • [ 2 ] [Weng, Shaohuang]Fujian Med Univ, Dept Pharmaceut Anal, Fuzhou 350005, Peoples R China
  • [ 3 ] [Zhong, Guangxian]Fujian Med Univ, Dept Pharmaceut Anal, Fuzhou 350005, Peoples R China
  • [ 4 ] [Lin, Xinhua]Fujian Med Univ, Dept Pharmaceut Anal, Fuzhou 350005, Peoples R China
  • [ 5 ] [Liu, Qicai]Fujian Med Univ, Dept Lab Med, Fuzhou 350005, Peoples R China
  • [ 6 ] [Liu, Qicai]Fujian Med Univ, Dept Gene Diag, Fuzhou 350005, Peoples R China
  • [ 7 ] [Liu, Ailin]Fujian Med Univ, Dept Nanobiomed Res Ctr, Fuzhou 350005, Peoples R China
  • [ 8 ] [Weng, Shaohuang]Fujian Med Univ, Dept Nanobiomed Res Ctr, Fuzhou 350005, Peoples R China
  • [ 9 ] [Zhong, Guangxian]Fujian Med Univ, Dept Nanobiomed Res Ctr, Fuzhou 350005, Peoples R China
  • [ 10 ] [Lin, Xinhua]Fujian Med Univ, Dept Nanobiomed Res Ctr, Fuzhou 350005, Peoples R China
  • [ 11 ] [Gao, Feng]Fujian Med Univ, Dept Pathol, Fuzhou 350005, Peoples R China
  • [ 12 ] [Liu, Jingfeng]Fujian Med Univ, Dept Surg, Fuzhou 350005, Peoples R China
  • [ 13 ] [Lin, Jian-hua]Fujian Med Univ, Affiliated Hosp 1, Dept Bone Oncol, Fuzhou 350005, Peoples R China
  • [ 14 ] [Chen, Xuhai]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350002, Peoples R China

Reprint 's Address:

  • [Lin, Xinhua]Fujian Med Univ, Dept Pharmaceut Anal, Fuzhou 350005, Peoples R China

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Source :

INTERNATIONAL JOURNAL OF NANOMEDICINE

ISSN: 1178-2013

Year: 2011

Volume: 6

Page: 2933-2939

3 . 1 3

JCR@2011

6 . 7 0 0

JCR@2023

ESI Discipline: PHARMACOLOGY & TOXICOLOGY;

JCR Journal Grade:2

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 12

30 Days PV: 0

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